A generic function to provide a summary of a 'psc' object obtained from pscfit.R
Usage
# S3 method for class 'psc'
summary(object, ...)Examples
e4_data <- psc::e4_data
gemCFM <- psc::gemCFM
psc <- pscfit(gemCFM,e4_data,nsim=1500,nchain=1)
#> Warning: 54 rows removed due to missing data in dataset
#>
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summary(psc)
#> Counterfactual Model (CFM):
#> A model of class 'flexsurvreg'
#> Fit with 5 internal knots
#>
#> CFM Formula:
#> Surv(time, cen) ~ LymphN + ResecM + Diff_Status + PostOpCA199
#> <environment: 0x560d55721878>
#>
#> CFM Summary:
#> Expected response for the outcome under the CFM:
#> S lo hi
#> 30.30 24.85 35.60
#>
#> Observed outcome from the Data Cohort:
#> [,1]
#> median 26.33
#> 0.95LCL 22.85
#> 0.95UCL 31.03
#>
#> MCMC Fit:
#> Posterior Distribution obtaine with fit summary:
#> variable rhat ess_bulk ess_tail mcse_mean
#> [1,] beta_1 1.01159 449.3011 438.4716 0.004208146
#>
#> Summary:
#> Posterior Distribution for beta:Call:
#> CFM model + beta
#>
#> Coefficients:
#> variable mean sd median q5
#> posterior beta_1 0.02521124 0.09063381 0.03095798 -0.1089901
#> q95
#> posterior 0.1622856